| Place | Name | YoB | Club | Time | R.T. | FINA Pt | 50 | ||
| 1. | Konrad Czerniak | (89) | Poland | 49.46 | + 0.70 | 853 | 23.57 | ||
| 2. | Markus Deibler | (90) | Germany | 49.50 | + 0.70 | 851 | 23.70 | ||
| 3. | Martin Verner | (80) | Czech Rep | 49.57 | + 0.67 | 847 | 23.97 | ||
| 4. | Steffen Deibler | (87) | Germany | 49.58 | + 0.65 | 846 | 23.90 | ||
| 5. | Stefan Nystrand | (81) | Sweden | 49.89 | + 0.85 | 831 | 23.63 | ||
| 6. | Emmanuel Vanluchene | (92) | Belgium | 49.91 | + 0.59 | 830 | 24.01 | ||
| 7. | Petter Stymne | (83) | Sweden | 49.99 | + 0.78 | 826 | 24.07 | ||
| 8. | Tiago Venancio | (87) | Portugal | 50.30 | + 0.70 | 811 | 23.73 |