| Final | ||||||
| Lane | Comp.No. | Name | AaD | Cat | Club/Country | Time |
| 0 | 1 | Francesco Bettella | 23 | S2 | Italy | 1:12.08 |
| 1 | 2 | James Anderson | 49 | S2 | StirlingSwim | 1:09.76 |
| 2 | 3 | Jan Povysil | 30 | S4 | Czech Rep | 48.77 |
| 3 | 4 | Cameron Leslie | 22 | S5 | New Zealand | 43.47 |
| 4 | 5 | Zul Abdullah | 40 | S5 | Malaysia | 42.55 |
| 5 | 6 | Zsolt Vereczkei | 35 | S5 | Hungary | 42.89 |
| 6 | 7 | Arnost Petracek | 21 | S4 | Czech Rep | 47.37 |
| 7 | 8 | Michael Schoenmaker | 29 | S4 | Netherlands | 52.81 |
| 8 | 9 | Iyad Shalabi | 25 | S2 | Israel | 1:10.75 |
| 9 | 10 | Hennadii Boiko | 38 | S1 | Ukraine | 1:25.00 |